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Deep Mutational Scanning

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Disrupting IFIT1-STAT2 viral evasion synergy yields live-attenuated flavivirus with enhanced immune priming

Diverse human viruses deploy a common immune-evasion strategy: viral 2'-O-methylation coupled with STAT2 antagonism. Yet the importance of this coupling and whether targeting the coupled functions offers benefits in vaccine development, remains unknown. Using deep mutational scanning of the dengue NS5 protein, we discovered that the two immune-evasion functions work synergistically to cripple interferon signaling.

bioRxiv 5d ago

How the body creates reliable antibodies out of biological chaos

How the body creates reliable antibodies out of biological chaos Sadie Harley Scientific Editor Robert Egan Associate Editor A new study tracking thousands of B cells across more than 100 germinal centers in mice reveals how the system consistently produces highly effective antibodies. The findings overturn longstanding ideas about how germinal centers function, revealing that they are far more selective than once thought, and challenges the idea that antibody improvement is driven mainly by...

Phys.org 4d ago

Targeting an allosteric binding site in the citrate transporter NaCT (SLC13A5)

The Na+-dependent citrate transporter NaCT (SLC13A5) is a key regulator of citrate homeostasis and has emerged as a therapeutic target for metabolic and neurological disease, including the SLC13A5 Epilepsy, a rare disease marked by severe sezures and neurodevelopmental delays. Current NaCT inhibitors are substrate-like molecules that competitively bind the substrate binding site. In this study, we identify previously unknown small molecule inhibitors of NaCT by targeting a putative...

bioRxiv 2d ago

Human-Like Neural Nets by Catapulting

Human-like Neural Nets by Catapulting Speculative proposal to create artificial neural nets with human-like performance by high-learning-rate/regularization training of overparameterized NNs to trigger catapulting/grokking. Over-parameterization as a route to true generalization would resolve many outstanding mysteries of artificial versus natural intelligence. There are many mysteries about deep learning and human intelligence, but we could describe the biggest anomaly this way: why are...

Hacker News 3d ago

Tiny membrane tethers revealed as key to plant cell survival in drought

Tiny membrane tethers revealed as key to plant cell survival in drought Sadie Harley Scientific Editor Robert Egan Associate Editor Water deficit resistance in plants has long been a topic of interest for cultivating reliable crops. Some plants can alter their above-ground structure to lock in moisture, while others develop deep, industrious roots that find hard-to-reach water sources. While such responses are obvious to the naked eye, we know little about how responses to environmental...

Phys.org 7d ago