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Lost in the Flow with Code Talkers: Unveiling the Instruction-Tuning Tax of Large Language Models in Code Tasks

arXiv:2606.08676v1 Announce Type: new Abstract: AI coding assistants have significantly improved developer productivity by automatically suggesting code that aligns with user intent, and many of these tools are now integrated directly into Integrated Development Environments (IDEs). Developers interact with code in two distinct cognitive modes: Flow and Command. While developers require tools that directly complete or infill code in unfinished programs during Flow mode, they also need tools...

arXiv CS 1d ago

BasalCell: A project scaffold generator for bioinformatics analysis

In the current bioinformatics landscape, where R-centric and Python-centric ecosystems coexist and overlap, there is an increasing demand for the organic integration of these disparate development environments. As bioinformatics practices become ubiquitous, it is crucial to lower the technical barriers for biologists to adopt software engineering standards, such as version control, environment reproducibility, code readability, continuous integration/continuous deployment (CI/CD), and...

bioRxiv 11d ago

Agentic AI arrives for Delphi and C++ Builder

Embarcadero has released Kai, an agentic AI assistant for RAD Studio, an IDE (integrated development environment) for Delphi and C++ Builder. Kai is offered as an extension, which means that by default RAD Studio lacks AI capabilities. The extension provides chat, code completion, and an MCP (model context protocol) server to enable other AI agents to communicate with the IDE.

The Register 9d ago

Principled Uncertainty in Clinical AI: End-to-End Bayesian Modelling and Algorithmic Equity Auditing Across Multimodal Patient Data

arXiv:2606.09789v1 Announce Type: new Abstract: Clinical artificial intelligence (AI) systems routinely produce predictions without principled quantification of uncertainty, limiting their trustworthiness in high-stakes medical environments. This paper presents an integrated research programme addressing two interconnected problems: (1) the development of a fully end-to-end Bayesian uncertainty modelling framework for multimodal clinical data, and (2) the application of calibrated...

arXiv CS 1d ago

A unified developmental framework of the human placenta in its uterine environment in vivo and in vitro

Despite advances in single-cell profiling of the human placenta, the genetic programs governing its physiological remodeling throughout gestation remain incompletely understood; this limits the interpretation of trophoblast organoid models. Here, we reconstruct the human placenta in its uterine environment across gestation by integrating public single-cell data into a unified developmental framework developed through a specialized computational strategy. We resolve 100 cell subtypes,...

bioRxiv 5d ago

Towards Serverless Semi-Decentralized Federated Learning with Heterogeneous Optimizers

Announce Type: new Abstract: We investigate cluster formation, involving the number and composition of clusters, in decentralized federated learning (FL) with heterogeneous machine learning (ML) optimizers. While clustering in centralized FL has enabled scalability and resource savings, its value and development in fully decentralized environments have yet to be explored. Optimizing cluster formation in such environments is challenging, especially due to the complex coupling between network...

arXiv CS 2d ago

What Breaks When LLMs Code? Characterizing Operational Safety Failures of Agentic Code Assistants

arXiv:2605.30777v1 Announce Type: new Abstract: Autonomous coding agents built on large language models (LLMs) are rapidly being integrated into development workflows, yet their operational safety properties remain poorly understood beyond evaluations of explicitly malicious inputs. In practice, high-impact failures arise during benign, goal-directed use through environment breakage, fabricated success reports, etc. that current benchmarks do not capture. What categories of operational...

arXiv CS 9d ago

CellSense: A Sub-6 GHz Cellular ISAC System for Clutter-Robust Passive Sensing

arXiv:2606.07900v1 Announce Type: new Abstract: Future wireless networks demand capabilities beyond traditional communication, driving the development of Integrated Sensing and Communication (ISAC) for environmental awareness, localization, and tracking. Ubiquitous cellular deployment allows ISAC to maximize spectral efficiency, lower costs, and expand sensing coverage. However, sub-6 GHz research has heavily favored communication, leaving sensing capabilities largely underexplored.

arXiv CS 1d ago

A Preliminary Model for Managing Technical Debt in an Agile Environment

arXiv:2606.07859v1 Announce Type: new Abstract: This paper presents a preliminary model for managing involuntary technical debt in agile environments by formulating, in an integrated way, the dynamics among backlog, debt, velocity, and economic value. The work distinguishes initiated but unfinished functional debt from a simple defect back log and from rework, interprets productivity degradation as technical-debt interest, and derives the naive maximum-remediation policy in order to show its...

arXiv CS 1d ago

Grep this: Microsoft grafts (most) Linux commands onto Windows

Steve Ballmer’s darkest fear has come to pass: Linux has worked itself into the deepest innards of Microsoft Windows itself. At the company’s annual Build developer conference this week, Microsoft released coreutils, a Rust-built multi-call binary file for Windows that serves over 75 Unix commands directly in the Windows CMD and PowerShell command lines – including favorites such as cat, ls, grep, and head. They join Linux favorites curl and sudo which were earlier added to the Microsoft...

The Register 7d ago