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Structures preserved by primitive actions of $S_\omega$

arXiv:2501.03789v4 Announce Type: replace-cross Abstract: We present a dichotomy for structures $A$ that are preserved by primitive actions of $S_{\omega} = \text{Sym}({\mathbb N})$: such a structure primitively positively constructs all finite structures and the constraint satisfaction problem is NP-complete, or the constraint satisfaction problem for $A$ is in P. To prove our result, we study the first-order reducts of the Johnson graph $J(k)$, for $k \geq 2$, whose automorphism group $G$...

arXiv CS 1d ago

The Unreasonable Redundancy of Nature's Protein Folds

The Unreasonable Redundancy of Nature's Protein Folds Over the last few years, deep neural networks have made generative language modeling dramatically more powerful, giving us large language models. A similar leap happened for continuous modalities like images and videos.

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A Systematic Benchmark of Physics-Informed Neural Network Architectures for the Stiff Poisson-Nernst-Planck System: Adaptive LossWeighting and Multi-Scale Resolution

Announce Type: new Abstract: The Poisson Nernst Planck PNP system constitutes a canonical stiff coupled PDE problem where the charge density prefactor produces extreme coefficient ratios and the electric double layer imposes sharp boundary layers. Physics informed neural networks PINNs are appealing here because they require no mesh and differentiate through the physics automatically. Spectral bias and multi task loss imbalance however have limited their accuracy on stiff PNP systems.

arXiv Physics 6d ago