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Mutation-dependent responses to sleep and exercise in clonal haematopoiesis

Abstract Clonal haematopoiesis (CH) activates inflammation and increases the risk of atherosclerosis1,2. Whether lifestyle alters CH clone expansion or the phenotypic programming of CH mutant cells, thereby affecting atherosclerosis, is unknown. Here, in humans and mice and across mutations in Jak2, Tet2, Trp53 and Dnmt3a, we demonstrate mutation-dependent responses to sleep and exercise in CH and show that mutant cells are uniquely sensitive to lifestyle.

Nature 21h ago

Derivative Informed Learning of Exchange-Correlation Functionals

arXiv:2606.04279v1 Announce Type: new Abstract: Machine-learned (ML) exchange-correlation (XC) functionals aim to replace human-designed density functional approximations by learning directly from reference data, but they still do not consistently outperform traditional $\mathcal{O}(N^4)$-scaling hybrid functionals. We study a hybrid-distillation setting in which $\mathcal{O}(N^3)$-scaling ML-XC functionals are trained to reproduce B3LYP/def2-SVP targets. We introduce Derivative Informed...

arXiv CS 6d ago

Scalable Derivative Gaussian Processes via Exact Gradient Reduction

Announce Type: cross Abstract: Gradient observations can substantially improve Gaussian process (GP) surrogates, particularly in high-dimensional settings where function evaluations are expensive. However, exact inference with $n$ function values and $n$ full gradients in $d$ dimensions scales cubically in the joint state size, imposing an intractable $\mathcal{O}(n^3 d^3)$ computational bottleneck.

arXiv CS 7d ago

An Efficient Genus Algorithm Based on Graph Rotations

arXiv:2411.07347v5 Announce Type: replace Abstract: We study the problem of determining the minimal genus of a simple finite connected graph. We present an algorithm which, for an arbitrary graph $G$ with $n$ vertices and $m$ edges, determines the orientable genus of $G$ in $O(n(4^m/n)^{n/t})$ steps where $t$ is the girth of $G$. This algorithm avoids difficulties that many other genus algorithms have with handling bridge placements which is a well-known issue. The algorithm has a number of...

arXiv CS 7d ago

Removing bottlenecks in the recognition of small $(k,\ell)$-graph classes

arXiv:2510.17665v2 Announce Type: replace Abstract: A graph is a $(k,\ell)$-graph if its vertex set can be partitioned into $k$ independent sets and $\ell$ cliques. This family simultaneously generalizes split, bipartite, and co-bipartite graphs. While the recognition problem is NP-complete whenever $k\geq 3$ or $\ell\geq 3$, the remaining small cases are polynomial-time solvable.

arXiv CS 9d ago

SIRT7 regulates dosage compensation and safeguards the female X chromosome

Abstract Sirtuins are deacetylases implicated in stress responses and longevity in mammals1,2. Although their differential impact on disease for the two sexes has been noted3,4,5,6,7, the underlying reasons are unclear. Here, using Sirt7 as a model in mice, we examine the mechanisms leading to sex differences and find that Sirt7−/− female mice have decreased fitness throughout their lifespan.

Nature 21h ago

On the Duke--Erd\H{o}s--R\"odl Problem at the One-Third Threshold

Announce Type: cross Abstract: Let $G$ be an $n$-vertex graph with $e(G)\ge n^2/ k$. We prove a self-contained internal short-cycle core theorem at the threshold $k\le n^{1/3}$: the graph $G$ contains a subgraph $H_6$ with $\Omega(n^2/ k^3)$ edges in which every two distinct edges lie together on a cycle of length at most $6$ contained in $H_6$, and a subgraph $H_8$ with $\Omega(n^2/k^2)$ edges in which every two distinct edges lie together on a cycle of length at most $8$ contained in...

arXiv CS 2d ago

Tree-Guided Identify-Then-Exploit: A Unified Framework of Best Arm Identification and Regret Minimization for Dueling Bandits

arXiv:2606.01799v1 Announce Type: new Abstract: We study $N$-armed stochastic dueling bandits under the Condorcet-winner assumption, where three widely adopted objectives are considered: best-arm identification (BAI), weak regret, and strong regret. We propose Tree-Guided Identify-Then-Exploit (TG-ITE), the first unified framework to tackle all these objectives to our knowledge. Without requiring stronger assumptions, we propose a shared tree-guided identification approach to find a...

arXiv CS 8d ago

Deterministic Distance Approximation in MPC via Improved Hitting Sets

Announce Type: new Abstract: In this paper, we provide the first deterministic algorithms with sublogarithmic round complexity for spanners and approximate shortest paths in various MPC models. Moreover, we significantly improve upon the state of the art in the deterministic Congested Clique. In particular, we obtain the following four results on undirected graphs: 1.

arXiv CS 7d ago

Lean 4 Machine-Verified Proof of P = NP via the Pedigree Polytope Membership Problem

arXiv:2606.03194v1 Announce Type: new Abstract: The Membership Problem for Pedigree Polytope (M3P) asks, given $X\in\mathbb{Q}^{\binom{n}{3}}$, whether $X\in\mathrm{conv}(P_n)$, where $P_n$ is the set of all pedigrees. A pedigree is a structured encoding of a Hamiltonian cycle construction in $K_n$. We establish that M3P is solvable in strongly polynomial time via a recursively constructed layered network $(N_k, R_k, \mu)$ and a multicommodity flow problem MCF$(k)$. The necessary and...

arXiv CS 7d ago