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SILAC-Site: A streamlined workflow for determining phosphopeptide stoichiometries

Mass spectrometry-based proteomics enables in-depth investigation of protein phosphorylation, quantifying tens of thousands of phosphosites per sample following phosphopeptide enrichment. However, critical information on phosphosite occupancy (stoichiometry) is typically lost during the phospho-enrichment process. Here, we introduce SILAC-Site, a SILAC-based fractionation-free and chemical labelling-free workflow for direct phosphosite stoichiometry evaluation using stable isotope labeling...

bioRxiv 9d ago