SV-eQTL
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Related Articles from SNS
Imputed graph-genotyped structural variants identify regulatory haplotypes associated with gene expression in Atlantic salmon
Structural variants (SVs) can affect gene regulation, but they are difficult to include in expression genetic studies when large RNA-seq cohorts lack whole-genome sequencing. This is common in non-human and non-model systems, where whole-genome sequencing at population scale remains costly. As a result, expression quantitative trait locus (eQTL) studies often rely on single nucleotide polymorphism (SNP) markers.